# 安装 BioMCP-TS

- 类型: MCP 工具
- 说明: Biomedical MCP server: genes, variants, trials, literature, patents, optional SQL/R/biowasm tools.
- 仓库: https://github.com/yeyuan98/biomcp-ts

## 方式一 · 一键代装（复制提示词让 AI 代劳）

### Claude Code
```
请帮我安装 askskill 上的 "BioMCP-TS" MCP 服务：
执行：claude mcp add 'io-github-yeyuan98-biomcp-ts' -- npx -y biomcp
```

### Codex
```
请帮我安装 askskill 上的 "BioMCP-TS" MCP 服务：
在 ~/.codex/config.toml 中添加：
[mcp_servers.io-github-yeyuan98-biomcp-ts]
command = "npx"
args = ["-y","biomcp"]
然后重启 Codex 生效
```

### Cursor
```
请帮我安装 askskill 上的 "BioMCP-TS" MCP 服务：
在 .cursor/mcp.json 的 "mcpServers" 中添加：
"io-github-yeyuan98-biomcp-ts": { "command": "npx", "args": ["-y","biomcp"] }
然后在 Cursor 设置 > MCP 中启用
```

## 方式二 · 命令行安装（原生命令与配置）

### Claude Code
```bash
claude mcp add --env ANALYSIS_BIOWASM=YOUR_VALUE --env ANALYSIS_R=YOUR_VALUE --env DB_TYPE=YOUR_VALUE --env NCBI_API_KEY=YOUR_VALUE --env S2_API_KEY=YOUR_VALUE --env OPENFDA_API_KEY=YOUR_VALUE --env ONCOKB_TOKEN=YOUR_VALUE --env DISGENET_API_KEY=YOUR_VALUE --transport stdio io-github-yeyuan98-biomcp-ts -- npx -y biomcp
```
需要环境变量：ANALYSIS_BIOWASM, ANALYSIS_R, DB_TYPE, NCBI_API_KEY, S2_API_KEY, OPENFDA_API_KEY, ONCOKB_TOKEN, DISGENET_API_KEY

### Codex
```bash
codex mcp add --env ANALYSIS_BIOWASM=YOUR_VALUE --env ANALYSIS_R=YOUR_VALUE --env DB_TYPE=YOUR_VALUE --env NCBI_API_KEY=YOUR_VALUE --env S2_API_KEY=YOUR_VALUE --env OPENFDA_API_KEY=YOUR_VALUE --env ONCOKB_TOKEN=YOUR_VALUE --env DISGENET_API_KEY=YOUR_VALUE io-github-yeyuan98-biomcp-ts -- npx -y biomcp
```
配置文件 ~/.codex/config.toml：
```toml
[mcp_servers.io-github-yeyuan98-biomcp-ts]
command = "npx"
args = ["-y","biomcp"]

[mcp_servers.io-github-yeyuan98-biomcp-ts.env]
ANALYSIS_BIOWASM = "YOUR_VALUE"
ANALYSIS_R = "YOUR_VALUE"
DB_TYPE = "YOUR_VALUE"
NCBI_API_KEY = "YOUR_VALUE"
S2_API_KEY = "YOUR_VALUE"
OPENFDA_API_KEY = "YOUR_VALUE"
ONCOKB_TOKEN = "YOUR_VALUE"
DISGENET_API_KEY = "YOUR_VALUE"
```
需要环境变量：ANALYSIS_BIOWASM, ANALYSIS_R, DB_TYPE, NCBI_API_KEY, S2_API_KEY, OPENFDA_API_KEY, ONCOKB_TOKEN, DISGENET_API_KEY

### Cursor
配置文件 .cursor/mcp.json：
```json
{
  "mcpServers": {
    "io-github-yeyuan98-biomcp-ts": {
      "command": "npx",
      "args": [
        "-y",
        "biomcp"
      ],
      "env": {
        "ANALYSIS_BIOWASM": "YOUR_VALUE",
        "ANALYSIS_R": "YOUR_VALUE",
        "DB_TYPE": "YOUR_VALUE",
        "NCBI_API_KEY": "YOUR_VALUE",
        "S2_API_KEY": "YOUR_VALUE",
        "OPENFDA_API_KEY": "YOUR_VALUE",
        "ONCOKB_TOKEN": "YOUR_VALUE",
        "DISGENET_API_KEY": "YOUR_VALUE"
      }
    }
  }
}
```
一键安装：cursor://anysphere.cursor-deeplink/mcp/install?name=io-github-yeyuan98-biomcp-ts&config=eyJjb21tYW5kIjoibnB4IiwiYXJncyI6WyIteSIsImJpb21jcCJdLCJlbnYiOnsiQU5BTFlTSVNfQklPV0FTTSI6IllPVVJfVkFMVUUiLCJBTkFMWVNJU19SIjoiWU9VUl9WQUxVRSIsIkRCX1RZUEUiOiJZT1VSX1ZBTFVFIiwiTkNCSV9BUElfS0VZIjoiWU9VUl9WQUxVRSIsIlMyX0FQSV9LRVkiOiJZT1VSX1ZBTFVFIiwiT1BFTkZEQV9BUElfS0VZIjoiWU9VUl9WQUxVRSIsIk9OQ09LQl9UT0tFTiI6IllPVVJfVkFMVUUiLCJESVNHRU5FVF9BUElfS0VZIjoiWU9VUl9WQUxVRSJ9fQ
需要环境变量：ANALYSIS_BIOWASM, ANALYSIS_R, DB_TYPE, NCBI_API_KEY, S2_API_KEY, OPENFDA_API_KEY, ONCOKB_TOKEN, DISGENET_API_KEY