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Access cBioPortal to explore cancer genomics alterations and cohort data.
Copy the install command and let the AI configure it · recommended for beginners
Please install the "Cbioportal" MCP server from askskill: Run: claude mcp add --transport http 'io-github-pipeworx-io-cbioportal' 'https://gateway.pipeworx.io/cbioportal/mcp'
Use Cbioportal to find TP53 mutation frequencies across common cancer types, list the top 10 cancer types, and provide a brief interpretation.
A ranked list of TP53 mutation frequencies by cancer type with a short research-oriented interpretation.
Use Cbioportal to analyze BRCA1, BRCA2, and PIK3CA alterations in a breast cancer cohort, comparing mutation, amplification, and deletion rates.
A comparison of alteration rates for the specified genes within the selected cohort.
Use Cbioportal to find study cohorts containing lung adenocarcinoma samples with both copy number and mutation data, and list cohort names, sample sizes, and data types.
A list of matching study cohorts with sample sizes and available data types.
Search and retrieve PubMed, protein, and nucleotide data from NCBI databases.
Connect AI to life science databases and tools for bioinformatics workflows.
Query gene-disease validity data and detect consensus or conflicts across assertions.
Search and access EBI BioStudies datasets and study records.
Search and retrieve biological pathway information from the open WikiPathways database.
Search drug targets, compounds, papers, and trials for preclinical discovery research.