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Search and download NCBI GEO gene expression data using natural language.
Copy the install command and let the AI configure it · recommended for beginners
No copy-paste install info for "geo-mcp" yet — see the docs or source repo.
Search NCBI GEO for human RNA expression datasets related to breast cancer. Prioritize series from the last five years and include GEO accession, sample count, and platform details.
A list of matching GEO series with accession IDs, titles, sample counts, platforms, and brief notes.
Download all sample metadata for GEO study GSEXXXXX, organize it into a structured table, and highlight groups, tissue source, and experiment type.
A structured sample metadata table for the study, ready for downstream analysis or review.
Find GEO samples and platforms related to single-cell liver fibrosis. List sample, platform, and profile results separately and report the count for each.
Separate sample, platform, and profile search results with counts for quick filtering.
Search NCBI genome and taxonomy data, then download packages in chat.
Search and access ENA RNA sequencing datasets with advanced filtering.
Search and retrieve PubMed, protein, and nucleotide data from NCBI databases.
Search gene expression datasets and experiment details from EBI Expression Atlas.
Query MGnify genomes and run KEGG annotation and module completeness analysis.
Access multiple gene data backends through one searchable unified MCP endpoint.